Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2ZZI0_LATCHPDZ domain containing 2. (2484 aa)    
Predicted Functional Partners:
PIM3
Serine/threonine-protein kinase; Proto-oncogene with serine/threonine kinase activity involved in cell survival and cell proliferation. Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. PIM subfamily.
      
 0.847
H3AHT3_LATCH
Uncharacterized protein.
 
     0.792
NAP1L1
Nucleosome assembly protein 1 like 1; Belongs to the nucleosome assembly protein (NAP) family.
    
 
 0.757
VGLL4
Vestigial like family member 4.
      
 0.728
ATXN1
Ataxin 1.
      
 0.661
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.571
CTNND2
Uncharacterized protein.
    
 
 0.498
H3B4B5_LATCH
Uncharacterized protein.
    
 
 0.498
PKP4
Plakophilin 4.
    
 
 0.498
IFT57
Intraflagellar transport 57.
    
 0.472
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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