STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZZI3_LATCHUncharacterized protein. (301 aa)    
Predicted Functional Partners:
CD68
Uncharacterized protein.
   
 
 
0.902
LAMP1
Lysosomal associated membrane protein 1.
     
 
0.900
NPRL2
NPR2 like, GATOR1 complex subunit.
    
 
 0.497
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 
 0.493
RPTOR
Regulatory associated protein of MTOR complex 1.
    
 
 0.492
NPRL3
NPR3 like, GATOR1 complex subunit.
    
 
 0.469
WDR24
WD repeat domain 24.
    
 
 0.461
WDR59
WD repeat domain 59.
    
 
 0.453
DEPDC5
DEP domain containing 5.
    
 
 0.450
SEH1L
SEH1 like nucleoporin; Belongs to the WD repeat SEC13 family.
    
   0.449
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.