STRINGSTRING
BRD9 protein (Latimeria chalumnae) - STRING interaction network
"BRD9" - Bromodomain containing 9 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRD9Bromodomain containing 9 (630 aa)    
Predicted Functional Partners:
ARID2
AT rich interactive domain 2 (ARID, RFX-like) (1771 aa)
     
 
  0.765
SS18
Synovial sarcoma translocation, chromosome 18 (259 aa)
     
 
  0.740
PBRM1
Polybromo 1 (1496 aa)
     
0.646
EPB41L2
Erythrocyte membrane protein band 4.1-like 2 (905 aa)
           
  0.580
WDR48
WD repeat domain 48 (677 aa)
     
        0.575
BRPF3
Bromodomain and PHD finger containing, 3 (1194 aa)
     
0.547
BRD1
Bromodomain containing 1 (1190 aa)
     
0.547
BRPF1
Bromodomain and PHD finger containing, 1 (1215 aa)
     
0.545
ASH1L
Ash1 (absent, small, or homeotic)-like (Drosophila) (925 aa)
     
  0.542
CAMTA2
Calmodulin binding transcription activator 2 (1630 aa)
           
  0.528
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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