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ARHGEF11 protein (Latimeria chalumnae) - STRING interaction network
"ARHGEF11" - Rho guanine nucleotide exchange factor in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF11Rho guanine nucleotide exchange factor (GEF) 11 (1546 aa)    
Predicted Functional Partners:
ENSLACG00000016941
Ras homolog family member A (193 aa)
       
  0.940
GNA13
Guanine nucleotide binding protein (G protein), alpha 13 (377 aa)
     
  0.927
GNA12
Guanine nucleotide binding protein (G protein) alpha 12 (382 aa)
     
  0.927
RHOC
Uncharacterized protein (193 aa)
       
  0.925
ARHGEF1
Rho guanine nucleotide exchange factor (GEF) 1 (717 aa)
     
 
0.841
ARHGEF12
Rho guanine nucleotide exchange factor (GEF) 12 (1565 aa)
         
 
0.800
SYNJ2
Synaptojanin 2 (1075 aa)
     
  0.774
SYNJ1
Synaptojanin 1 (1563 aa)
     
  0.774
CDC42
Cell division cycle 42 (GTP binding protein, 25kDa) (156 aa)
       
  0.650
RHOJ
Ras homolog family member J (136 aa)
     
  0.645
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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