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TMBIM4 protein (Latimeria chalumnae) - STRING interaction network
"TMBIM4" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMBIM4Uncharacterized protein (283 aa)    
Predicted Functional Partners:
MCTP1
Multiple C2 domains, transmembrane 1 (529 aa)
     
   
  0.474
QSOX2
Quiescin Q6 sulfhydryl oxidase 2 (644 aa)
           
  0.450
QSOX1
Quiescin Q6 sulfhydryl oxidase 1 (616 aa)
           
  0.450
PSMB2
Proteasome (prosome, macropain) subunit, beta type, 2; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (199 aa)
     
   
  0.431
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase (541 aa)
     
 
  0.417
FBXW11
F-box and WD repeat domain containing 11 (529 aa)
     
 
  0.417
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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