Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC102357417Uncharacterized protein; Belongs to the cytochrome P450 family. (512 aa)    
Predicted Functional Partners:
HSD3B7
Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7; Belongs to the 3-beta-HSD family.
   
 0.951
AKR1D1
Aldo-keto reductase family 1 member D1.
     
 0.908
LOC102347924
Si:ch211-113j14.1; Belongs to the cytochrome P450 family.
    
 0.908
LOC102357152
Uncharacterized protein; Belongs to the cytochrome P450 family.
    
 0.908
CYP27A1
Cytochrome P450 family 27 subfamily A member 1; Belongs to the cytochrome P450 family.
    
 0.908
EAF2-2
Si:dkey-91i10.3; Belongs to the cytochrome P450 family.
    
 0.908
LSS
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 0.797
SC5D
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 0.688
CH25H
Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family.
   
 0.671
LOC102354597
Cholesterol 25-hydroxylase like 1, tandem duplicate 2; Belongs to the sterol desaturase family.
   
 0.671
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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