Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DCHS2Uncharacterized protein. (3211 aa)    
Predicted Functional Partners:
FJX1
Four-jointed box kinase 1.
   
 
 0.667
CTNNB1
Catenin beta 1.
    
 0.655
JUP
Junction plakoglobin.
    
 0.606
H3A003_LATCH
Uncharacterized protein.
   
 
 0.551
H3AIL3_LATCH
Uncharacterized protein.
   
 
 0.551
FAT4
FAT atypical cadherin 4.
   
 
 0.551
GPC4
Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 
 0.550
TBX15
T-box transcription factor 15.
      
 0.507
MAATS1
MYCBP-associated, testis expressed 1.
    
 0.501
KCTD15
Potassium channel tetramerization domain containing 15.
      
 0.496
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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