STRINGSTRING
GC protein (Latimeria chalumnae) - STRING interaction network
"GC" - Group-specific component (vitamin D binding protein) in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCGroup-specific component (vitamin D binding protein) (392 aa)    
Predicted Functional Partners:
CUBN
Cubilin (intrinsic factor-cobalamin receptor) (2936 aa)
       
  0.682
LRP2
Low density lipoprotein receptor-related protein 2 (4649 aa)
       
  0.668
SELENBP1
Selenium binding protein 1 (409 aa)
           
  0.551
VDR
Vitamin D (1,25- dihydroxyvitamin D3) receptor (427 aa)
           
  0.491
LRP1
Low density lipoprotein receptor-related protein 1 (4329 aa)
       
  0.473
BMP1
Bone morphogenetic protein 1 (978 aa)
       
  0.459
TLL1
Tolloid-like 1 (667 aa)
       
  0.459
TLL2
Tolloid-like protein 2 (899 aa)
       
  0.459
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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