STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBN2Uncharacterized protein. (2561 aa)    
Predicted Functional Partners:
FBN1
Fibrillin 1.
  
 
0.707
MFAP2
Microfibril associated protein 2.
   
 0.686
LOC102349388
Uncharacterized protein.
   
 0.649
LUM
Lumican.
   
 0.622
FURIN
Furin, paired basic amino acid cleaving enzyme; Belongs to the peptidase S8 family.
   
 
 0.563
PCSK4
Proprotein convertase subtilisin/kexin type 4; Belongs to the peptidase S8 family.
   
 
 0.563
COL8A1
Collagen type VIII alpha 1 chain.
   
 0.541
MMP15
Matrix metallopeptidase 15b.
   
 0.519
ITGB6
Integrin beta; Belongs to the integrin beta chain family.
    
 0.509
H3AM01_LATCH
Integrin beta; Belongs to the integrin beta chain family.
   
 0.509
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.