STRINGSTRING
ENSLACG00000002554 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000002554" - SUMO1/sentrin/SMT3 specific peptidase 3b in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000002554SUMO1/sentrin/SMT3 specific peptidase 3b (462 aa)    
Predicted Functional Partners:
TEX10
Testis expressed 10 (930 aa)
     
 
  0.946
WDR18
WD repeat domain 18 (431 aa)
     
 
  0.945
SUMO1
Small ubiquitin-like modifier 1 (100 aa)
     
 
  0.888
SENP7
Uncharacterized protein; SUMO1/sentrin specific peptidase 7 (705 aa)
     
 
  0.874
SENP6
Uncharacterized protein; SUMO1/sentrin specific peptidase 6 (1078 aa)
     
 
  0.872
EIF4A1
Eukaryotic translation initiation factor 4A, isoform 1B; Belongs to the DEAD box helicase family (407 aa)
 
   
 
  0.844
LAS1L
Uncharacterized protein; LAS1-like (S. cerevisiae) (405 aa)
     
 
  0.797
ENSLACG00000012612
Small ubiquitin-related modifier; SMT3 suppressor of mif two 3 homolog 2b (110 aa)
     
 
  0.775
SUMO2
Small ubiquitin-related modifier; SMT3 suppressor of mif two 3 homolog 2b (96 aa)
     
 
  0.775
RANGAP1
Ran GTPase activating protein 1 (615 aa)
     
 
  0.773
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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