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STRINGSTRING
CCDC3 protein (Latimeria chalumnae) - STRING interaction network
"CCDC3" - Coiled-coil domain containing 3 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC3Coiled-coil domain containing 3 (273 aa)    
Predicted Functional Partners:
CHODL
Chondrolectin (286 aa)
           
  0.646
SEPHS1
Selenophosphate synthetase 1 (392 aa)
           
  0.589
SERTAD4
SERTA domain containing 4 (337 aa)
     
   
  0.555
COL18A1
Collagen type XVIII, alpha 1 (1308 aa)
     
   
  0.550
COCH
Cochlin (547 aa)
           
  0.548
ENSLACG00000003824
Uncharacterized protein (180 aa)
           
  0.548
KERA
Keratocan (356 aa)
     
   
  0.521
MCM10
Minichromosome maintenance complex component 10 (878 aa)
           
  0.491
MKX
Mohawk homeobox (284 aa)
     
   
  0.487
MAP4K3
Mitogen-activated protein kinase kinase kinase kinase 3; Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. STE20 subfamily (869 aa)
           
  0.461
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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