STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLSTN3Calsyntenin 3. (668 aa)    
Predicted Functional Partners:
USP5
Ubiquitin carboxyl-terminal hydrolase.
      
 0.791
CDCA3
Uncharacterized protein.
      
 0.744
LRRTM1
Leucine rich repeat transmembrane neuronal 1.
   
  
 0.712
SH3BP5L
SH3 binding domain protein 5 like.
      
 0.685
GNB3
G protein subunit beta 3.
   
  
 0.674
TELO2
Telomere maintenance 2.
      
 0.506
PEX5
Peroxisomal biogenesis factor 5.
 
 
  
 0.461
IGSF21
Immunoglobin superfamily member 21.
   
 
 0.453
S100B
S100 calcium binding protein B; Belongs to the S-100 family.
   
  
 0.450
SH3BP5
SH3 domain binding protein 5.
      
 0.434
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.