Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2ZZP6_LATCHDUF4371 domain-containing protein. (204 aa)    
Predicted Functional Partners:
H2ZU64_LATCH
Dimer_Tnp_hAT domain-containing protein.
 
     0.520
H3BBT2_LATCH
Dimer_Tnp_hAT domain-containing protein.
  
     0.517
H2ZXZ5_LATCH
Dimer_Tnp_hAT domain-containing protein.
  
     0.508
H3A5I6_LATCH
Uncharacterized protein.
  
 
   0.466
H2ZUC9_LATCH
Dimer_Tnp_hAT domain-containing protein.
  
     0.462
H3ADE7_LATCH
Dimer_Tnp_hAT domain-containing protein.
  
     0.451
H3BAF9_LATCH
DUF4371 domain-containing protein.
  
     0.447
H3A9U5_LATCH
Uncharacterized protein.
  
     0.435
H3AD30_LATCH
DUF4371 domain-containing protein.
  
  
  0.429
H3AN92_LATCH
DUF4371 domain-containing protein.
  
  
  0.420
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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