STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP8A1ATPase phospholipid transporting 8A1. (347 aa)    
Predicted Functional Partners:
ATP9B
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
 
  
 0.936
TMEM30A
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.705
LOC102359099
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.705
TMEM30B
Cell cycle control protein; Belongs to the CDC50/LEM3 family.
   
 0.663
SLC17A8
Solute carrier family 17 member 8.
    
 
 0.525
SLC26A5
Solute carrier family 26 member 5.
   
  
 0.487
WFS1
Wolframin ER transmembrane glycoprotein.
    
 
 0.468
MYO6
Myosin VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
  
 0.467
ATP1B4
Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.
    
 0.449
ADGRV1
Adhesion G protein-coupled receptor V1.
    
 
 0.444
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.