Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACBD3Acyl-CoA binding domain containing 3. (525 aa)    
Predicted Functional Partners:
TBC1D22A
TBC1 domain family member 22A.
    
 
 0.981
BLZF1
Basic leucine zipper nuclear factor 1.
    
 
 0.958
LOC102351525
Hematopoietic cell-specific Lyn substrate 1.
    
 0.917
PI4KB
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
    
 
 0.899
TBC1D22B
TBC1 domain family member 22B.
    
 
 0.851
GBF1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
      
 0.790
CTTN
Cortactin.
    
 0.752
EPRS1
Glutamyl-prolyl-tRNA synthetase.
   
  
 0.742
PPM1H
Protein phosphatase, Mg2+/Mn2+ dependent 1H.
    
 
 0.730
PPM1L
Protein phosphatase, Mg2+/Mn2+ dependent 1L.
   
  
 0.681
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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