STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLAG1PLAG1 zinc finger. (502 aa)    
Predicted Functional Partners:
NR6A1
Nuclear receptor subfamily 6 group A member 1.
    
 0.725
CTNNB1
Catenin beta 1.
    
 0.648
EIF2AK3
Eukaryotic translation initiation factor 2 alpha kinase 3.
    
 0.607
SLITRK6
SLIT and NTRK like family member 6.
    
 0.604
LCORL
Ligand dependent nuclear receptor corepressor like.
    
 
 0.596
FBN1
Fibrillin 1.
    
 0.593
CBS
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 
 0.582
JDP2
Jun dimerization protein 2.
    
 0.564
CCN3
Cellular communication network factor 3.
      
 0.554
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
      
 0.553
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.