Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLAG1PLAG1 zinc finger. (502 aa)    
Predicted Functional Partners:
GHSR
Growth hormone secretagogue receptor; Belongs to the G-protein coupled receptor 1 family.
    
 0.927
CDX1
Caudal type homeobox 1a.
    
 
 0.927
EIF2AK3
Eukaryotic translation initiation factor 2 alpha kinase 3.
    
 0.860
TCF7
Transcription factor 7.
    
 
 0.853
SLITRK6
SLIT and NTRK like family member 6.
    
 0.793
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
      
 0.697
HTT
Huntingtin.
    
 
 0.688
NR6A1
Nuclear receptor subfamily 6 group A member 1.
    
 0.686
LTV1
LTV1 ribosome biogenesis factor.
     
 0.647
CBS
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 
 0.645
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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