STRINGSTRING
GP1BA protein (Latimeria chalumnae) - STRING interaction network
"GP1BA" - Glycoprotein Ib in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GP1BAGlycoprotein Ib (platelet), alpha polypeptide (200 aa)    
Predicted Functional Partners:
VWF
Von Willebrand factor (2833 aa)
       
  0.949
F2
Coagulation factor II (thrombin); Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing (618 aa)
       
  0.938
GP1BB
Glycoprotein Ib (platelet), beta polypeptide (204 aa)
     
0.908
PPIE
Peptidylprolyl isomerase E (cyclophilin E); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (302 aa)
     
  0.847
RAD54B
RAD54 homolog B (S. cerevisiae) (2005 aa)
   
  0.810
HSP90AA1
Heat shock protein 90kDa alpha (cytosolic), class A member 1 (725 aa)
       
  0.786
HSP90AB1
Heat shock protein 90kDa alpha (cytosolic), class B member 1 (734 aa)
       
  0.786
ENSLACG00000000733
Uncharacterized protein (730 aa)
       
  0.786
MYO16
Myosin XVI (786 aa)
     
  0.702
PYGM
Phosphorylase, glycogen, muscle; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (1365 aa)
     
  0.694
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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