STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBK1Serine/threonine-protein kinase SBK1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (404 aa)    
Predicted Functional Partners:
TANC1
Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1.
      
 0.547
DHH
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
      
 0.540
PPTC7
Protein phosphatase; Belongs to the PP2C family.
   
  
 0.535
LOC102363082
Protein phosphatase; Belongs to the PP2C family.
   
  
 0.535
NAT8L
N-acetyltransferase 8 like.
      
 0.534
H3A6T5_LATCH
N-acetyltransferase domain-containing protein.
      
 0.534
RBM28
Uncharacterized protein.
      
 0.523
H3A1V2_LATCH
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.510
RIOK3
Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
      
 0.472
LOC102360329
TLC domain containing 4a.
   
  
 0.428
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.