STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFC3H1Zinc finger C3H1-type containing. (1961 aa)    
Predicted Functional Partners:
MTREX
Mtr4 exosome RNA helicase.
    
 
 0.966
PAPOLA
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 
 0.893
PAPOLG
Poly(A) polymerase gamma.
   
 
 0.892
TSPAN8
Tetraspanin.
      
 0.796
SERGEF
Secretion regulating guanine nucleotide exchange factor.
      
 0.789
CPNE8
Copine 8.
      
 0.787
USH1C
USH1 protein network component harmonin.
      
 0.741
PNISR
PNN interacting serine and arginine rich protein.
   
    0.740
H3A117_LATCH
Helicase ATP-binding domain-containing protein.
    
 
 0.736
RBM26
RNA binding motif protein 26.
   
 
 0.710
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.