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PELI3 protein (Latimeria chalumnae) - STRING interaction network
"PELI3" - Pellino E3 ubiquitin protein ligase family member 3 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PELI3Pellino E3 ubiquitin protein ligase family member 3 (443 aa)    
Predicted Functional Partners:
MYD88
Myeloid differentiation primary response 88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response (286 aa)
       
  0.641
IRAK4
Interleukin-1 receptor-associated kinase 4 (454 aa)
     
  0.628
IRAK1
Interleukin-1 receptor-associated kinase 1 (673 aa)
     
  0.568
ENSLACG00000001917
Uncharacterized protein (553 aa)
       
  0.512
ENSLACG00000001485
Uncharacterized protein (450 aa)
       
  0.512
TRAF6
TNF receptor-associated factor 6, E3 ubiquitin protein ligase (559 aa)
     
  0.479
UBE2N
Ubiquitin-conjugating enzyme E2N (159 aa)
       
    0.465
UXS1
UDP-glucuronate decarboxylase 1 (359 aa)
       
      0.446
UBE2V1
Ubiquitin-conjugating enzyme E2 variant 1 (153 aa)
       
  0.434
ENSLACG00000013336
Ubiquitin-conjugating enzyme E2 variant 2 (102 aa)
       
  0.429
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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