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STRINGSTRING
ENSLACG00000002598 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000002598" - Histidine ammonia-lyase in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000002598Histidine ammonia-lyase (539 aa)    
Predicted Functional Partners:
UROC1
Urocanate hydratase 1 (636 aa)
 
  0.987
HDC
Histidine decarboxylase (666 aa)
     
 
  0.924
CNDP1
Carnosine dipeptidase 1 (metallopeptidase M20 family) (490 aa)
   
 
  0.911
CNDP2
CNDP dipeptidase 2 (metallopeptidase M20 family) (474 aa)
   
 
  0.911
ENSLACG00000000731
Histidine ammonia-lyase; Belongs to the PAL/histidase family (627 aa)
   
   
 
0.802
ENSLACG00000004361
Uncharacterized protein (196 aa)
   
  0.786
AMDHD1
Uncharacterized protein; Amidohydrolase domain containing 1 (161 aa)
 
   
  0.740
RRBP1
Ribosome binding protein 1 (1345 aa)
     
        0.586
CPB2
Carboxypeptidase B2 (plasma) (426 aa)
   
        0.537
ACSF3
Uncharacterized protein; acyl-CoA synthetase family member 3 (345 aa)
   
   
  0.535
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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