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HTRA4 protein (Latimeria chalumnae) - STRING interaction network
"HTRA4" - HtrA serine peptidase 4 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTRA4HtrA serine peptidase 4 (461 aa)    
Predicted Functional Partners:
PINK1
PTEN induced putative kinase 1 (467 aa)
     
 
  0.688
PARL
Presenilin associated, rhomboid-like a (373 aa)
     
 
  0.572
DCAF6
DDB1 and CUL4 associated factor 6 (908 aa)
     
   
  0.557
ENDOG
Endonuclease G (312 aa)
     
   
  0.557
MRPS18A
Mitochondrial ribosomal protein S18A (171 aa)
           
  0.550
ZNHIT6
Zinc finger, HIT-type containing 6 (299 aa)
           
  0.548
HDLBP
High density lipoprotein binding protein (1268 aa)
           
  0.548
CLPP
ATP-dependent Clp protease proteolytic subunit; Caseinolytic mitochondrial matrix peptidase proteolytic subunit (247 aa)
   
 
  0.545
TRAP1
TNF receptor-associated protein 1 (718 aa)
     
   
  0.535
YME1L1
YME1-like 1 ATPase; Belongs to the AAA ATPase family (682 aa)
   
 
  0.528
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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