STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMC1Laminin subunit gamma 1. (1472 aa)    
Predicted Functional Partners:
LAMB1
Laminin subunit beta 1.
   
0.954
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
   
 0.948
DAG1
Dystroglycan 1.
   
 0.937
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.934
LOC102349081
Integrin beta; Belongs to the integrin beta chain family.
   
 0.934
H3AIV1_LATCH
Laminin N-terminal domain-containing protein.
 
 
 0.931
ITGAV
Integrin_alpha2 domain-containing protein.
    
 0.930
ITGB8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.920
SV2B
Synaptic vesicle glycoprotein 2B.
     
 0.913
LAMA1
Laminin subunit alpha 1.
   
0.890
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.