STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDFY3Uncharacterized protein. (854 aa)    
Predicted Functional Partners:
H3AB29_LATCH
Uncharacterized protein.
 
   
 0.928
H3AZF3_LATCH
Uncharacterized protein.
 
   
 0.908
SQSTM1
Sequestosome 1.
   
 
 0.825
CDAN1
Codanin 1.
      
 0.774
ZWILCH
Zwilch kinetochore protein.
      
 0.762
LOC102362716
Poly (ADP-ribose) glycohydrolase, like.
 
      0.748
ATG5
Autophagy protein 5; Involved in autophagic vesicle formation.
    
 
 0.720
EPS15L1
Epidermal growth factor receptor pathway substrate 15 like 1.
    
 
 0.718
IL13RA2
Interleukin 13 receptor subunit alpha 2.
      
 0.704
GPRC6A
G protein-coupled receptor class C group 6 member A.
      
 0.659
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.