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STRINGSTRING
BSX protein (Latimeria chalumnae) - STRING interaction network
"BSX" - Brain-specific homeobox in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSXBrain-specific homeobox (249 aa)    
Predicted Functional Partners:
SOX5
SRY-box 5; SRY (sex determining region Y)-box 5 (757 aa)
     
 
  0.921
NEUROG1
Uncharacterized protein; Neurogenin 1 (227 aa)
     
   
  0.847
SOX6
SRY-box 6; SRY (sex determining region Y)-box 6 (814 aa)
     
 
  0.837
ENSLACG00000012408
POU domain, class 5, transcription factor 3 (452 aa)
     
 
  0.819
SPTSSB
Serine palmitoyltransferase, small subunit B (80 aa)
     
   
  0.715
SOX3
SRY-box 3; SRY (sex determining region Y)-box 3 (304 aa)
     
 
  0.694
FOXD3
Forkhead box D3 (373 aa)
     
 
  0.660
ITPKA
Kinase; Inositol-trisphosphate 3-kinase A; Belongs to the inositol phosphokinase (IPK) family (308 aa)
           
  0.652
LHX4
LIM homeobox 4 (312 aa)
     
   
  0.651
MYT1
Myelin transcription factor 1 (1118 aa)
           
  0.625
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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