Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FHAD1Forkhead associated phosphopeptide binding domain 1. (1285 aa)    
Predicted Functional Partners:
SEL1L3
SEL1L family member 3.
      
 0.806
SUSD4
Sushi domain containing 4.
      
 0.641
BCAS3
BCAS3 microtubule associated cell migration factor.
      
 0.641
ZNF407-2
Uncharacterized protein.
      
 0.593
ZNF407
Zinc finger protein 407.
      
 0.593
TTC34
Tetratricopeptide repeat domain 34.
      
 0.470
GNA12
G protein subunit alpha 12.
      
 0.467
GLDC
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
      
 0.467
CENPK
Centromere protein K.
      
 0.438
ATAD5
ATPase family AAA domain containing 5.
      
 0.435
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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