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CHRNE protein (Latimeria chalumnae) - STRING interaction network
"CHRNE" - Cholinergic receptor, nicotinic, epsilon in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHRNECholinergic receptor, nicotinic, epsilon (muscle) (508 aa)    
Predicted Functional Partners:
CHRND
Cholinergic receptor, nicotinic, delta (muscle) (525 aa)
     
 
0.516
CHRNB4
Cholinergic receptor, nicotinic, beta 4 (neuronal) (552 aa)
       
0.492
CHRNB2
Cholinergic receptor, nicotinic, beta 2 (neuronal) (478 aa)
       
0.492
RAPSN
Receptor-associated protein of the synapse (420 aa)
     
  0.491
BLZF1
Basic leucine zipper nuclear factor 1 (404 aa)
           
  0.478
ENSLACG00000007760
Rieske (Fe-S) domain containing (160 aa)
           
  0.449
CHRNA4
Cholinergic receptor, nicotinic, alpha 4 (neuronal) (553 aa)
       
0.420
C1orf114
Chromosome 1 open reading frame 114 (518 aa)
           
  0.418
CHRNA2
Cholinergic receptor, nicotinic, alpha 2 (neuronal) (498 aa)
       
0.417
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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