STRINGSTRING
ARL4A protein (Latimeria chalumnae) - STRING interaction network
"ARL4A" - ADP-ribosylation factor-like 4A in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARL4AADP-ribosylation factor-like 4A (207 aa)    
Predicted Functional Partners:
MYO16
Myosin XVI (786 aa)
     
  0.852
ARFGAP1
ADP-ribosylation factor GTPase activating protein 1 (417 aa)
     
  0.822
GBF1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1 (1912 aa)
     
  0.796
CYTH1
Cytohesin 1 (321 aa)
     
  0.781
CYTH3
Cytohesin 3 (394 aa)
     
  0.781
CYTH4
Cytohesin 4 (369 aa)
     
  0.781
ENSLACG00000007804
Uncharacterized protein (272 aa)
     
  0.781
PI4KB
Phosphatidylinositol 4-kinase, catalytic, beta (786 aa)
     
  0.757
PHLPP2
PH domain and leucine rich repeat protein phosphatase 2 (1186 aa)
   
  0.719
COPG1
Coatomer protein complex, subunit gamma 1; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (879 aa)
     
  0.718
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
Server load: low (12%) [HD]