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STRINGSTRING
ELOF1 protein (Latimeria chalumnae) - STRING interaction network
"ELOF1" - Transcription elongation factor 1 homolog in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELOF1Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions (83 aa)    
Predicted Functional Partners:
SYT16
Synaptotagmin XVI (492 aa)
           
  0.895
BRCC3
BRCA1/BRCA2-containing complex, subunit 3 (291 aa)
     
   
  0.887
POLR2A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1920 aa)
     
 
  0.793
POLR2C
Polymerase (RNA) II (DNA directed) polypeptide C, 33kDa (323 aa)
     
 
  0.790
EXOSC5
Exosome component 5 (198 aa)
     
   
  0.784
ACTR10
Actin-related protein 10 homolog (S. cerevisiae); Belongs to the actin family (414 aa)
     
   
  0.780
SUPT5H
Transcription elongation factor SPT5; Suppressor of Ty 5 homolog (S. cerevisiae) (1081 aa)
       
 
  0.770
SYT14
Synaptotagmin XIVb (436 aa)
           
  0.767
SLC25A30
Solute carrier family 25 (mitochondrial carrier, brain), member 14; Belongs to the mitochondrial carrier (TC 2.A.29) family (291 aa)
           
  0.764
SLC12A4
Solute carrier family 12 (potassium/chloride transporter), member 4 (1056 aa)
           
  0.763
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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