STRINGSTRING
IRX2 protein (Latimeria chalumnae) - STRING interaction network
"IRX2" - Iroquois homeobox 2 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IRX2Iroquois homeobox 2 (463 aa)    
Predicted Functional Partners:
ENSLACG00000017961
Uncharacterized protein (92 aa)
     
  0.660
PBX4
pre-B-cell leukemia homeobox 4 (295 aa)
     
  0.660
ENSLACG00000009441
Uncharacterized protein (101 aa)
     
  0.660
ENSLACG00000004122
Uncharacterized protein (415 aa)
     
  0.660
PBX2
pre-B-cell leukemia homeobox 2 (269 aa)
     
  0.660
PBX1
pre-B-cell leukemia transcription factor 1 (358 aa)
     
0.584
PBX3
pre-B-cell leukemia homeobox 3 (343 aa)
     
0.584
WDR38
WD repeat domain 38 (293 aa)
     
  0.480
GBX2
Gastrulation brain homeobox 2 (344 aa)
     
  0.423
AKAP11
A kinase (PRKA) anchor protein 11 (1808 aa)
           
  0.418
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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