Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102358578Transmembrane protein 189. (285 aa)    
Predicted Functional Partners:
LOC102347500
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.904
LOC102354153
Si:ch211-212o1.2.
  
  
 
0.901
LPCAT4
Lysophosphatidylcholine acyltransferase 4.
     
  0.900
LOC102361756
Phospholipase D family, member 7.
     
  0.900
PLD2-2
Uncharacterized protein.
     
  0.900
PLD4
Phospholipase D family member 4.
     
  0.900
PLD1
Phospholipase.
     
  0.900
CEPT1
Choline/ethanolamine phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
  0.900
PLD3
Phospholipase D family member 3.
     
  0.900
UBE2V1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
 
 
  0.855
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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