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STRINGSTRING
LPAR6 protein (Latimeria chalumnae) - STRING interaction network
"LPAR6" - Lysophosphatidic acid receptor 6 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LPAR6Lysophosphatidic acid receptor 6; Belongs to the G-protein coupled receptor 1 family (351 aa)    
Predicted Functional Partners:
MTDH
Metadherin b (606 aa)
           
  0.880
LIPI
Lipase, member I (444 aa)
           
  0.808
SGOL1
Uncharacterized protein; Shugoshin-like 1 (S. pombe) (672 aa)
           
  0.774
EMP2
Epithelial membrane protein 2 (160 aa)
       
 
  0.772
TAF7
TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor (366 aa)
           
  0.769
LPAR1
Lysophosphatidic acid receptor 1; Belongs to the G-protein coupled receptor 1 family (346 aa)
     
   
  0.675
CDADC1
Cytidine and dCMP deaminase domain containing 1 (485 aa)
           
  0.656
LPAR2
Lysophosphatidic acid receptor 2; Belongs to the G-protein coupled receptor 1 family (246 aa)
           
  0.651
LIPC
Lipase, hepatic (503 aa)
           
  0.644
ENSLACG00000013194
Myosin binding protein Hb (522 aa)
           
  0.582
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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