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STRINGSTRING
ELL protein (Latimeria chalumnae) - STRING interaction network
"ELL" - Elongation factor RNA polymerase II in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELLElongation factor RNA polymerase II (635 aa)    
Predicted Functional Partners:
AFF4
AF4/FMR2 family, member 4 (1163 aa)
     
 
  0.919
EAF1
ELL associated factor 1 (260 aa)
     
 
  0.838
MLLT1
MLLT1, super elongation complex subunit; Myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 (488 aa)
     
 
  0.819
SNF8
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs (258 aa)
       
 
  0.809
EAF2
ELL associated factor 2 (257 aa)
     
 
  0.777
AFF1
AF4/FMR2 family, member 1 (1215 aa)
       
 
  0.774
VPS36
Vacuolar protein sorting 36 homolog (S. cerevisiae) (261 aa)
           
  0.774
ICE2
Interactor of little elongator complex ELL subunit 2 (1009 aa)
     
 
  0.738
METTL6
Methyltransferase like 6 (314 aa)
     
   
  0.661
GAS7
Uncharacterized protein; Growth arrest-specific 7 (207 aa)
           
  0.655
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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