Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H3A079_LATCHUncharacterized protein. (965 aa)    
Predicted Functional Partners:
EFHB
EF-hand domain family member B.
   
 
 0.975
EFHC2
EF-hand domain containing 2.
   
 
 0.971
EFHC1
EF-hand domain containing 1.
   
 
 0.958
CFAP52
Cilia and flagella associated protein 52; Belongs to the peptidase C19 family.
   
 0.936
TEKT2
Tektin 2.
   
 
 0.932
LOC106704152
Uncharacterized protein.
   
 
 0.910
H3B708_LATCH
Uncharacterized protein.
   
 
 0.905
FAM183A
Family with sequence similarity 183 member A.
    
 
 0.891
CFAP161
Cilia and flagella associated protein 161.
   
 
 0.889
TEKT4
Tektin 4.
   
 
 0.873
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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