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SDR39U1 protein (Latimeria chalumnae) - STRING interaction network
"SDR39U1" - Short chain dehydrogenase/reductase family 39U, member 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR39U1Short chain dehydrogenase/reductase family 39U, member 1 (294 aa)    
Predicted Functional Partners:
STOML1
Stomatin (EPB72)-like 1 (336 aa)
     
   
  0.784
RIPK3
Receptor-interacting serine-threonine kinase 3 (266 aa)
           
  0.768
RNF126
Ring finger protein 126 (313 aa)
           
  0.753
CD276
CD276 molecule (324 aa)
           
  0.545
ENSLACG00000006373
Uncharacterized protein (910 aa)
           
  0.526
CIDEB
Cell death-inducing DFFA-like effector b (225 aa)
           
  0.468
GZMK
Granzyme K (granzyme 3; tryptase II) (263 aa)
           
  0.458
LOXL1
Lysyl oxidase-like 1 (569 aa)
           
  0.439
BSG
Basigin (Ok blood group) (368 aa)
           
  0.437
CRY2
Cryptochrome 2 (photolyase-like) (434 aa)
   
   
  0.410
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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