Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THBS2Uncharacterized protein. (1177 aa)    
Predicted Functional Partners:
ITGAV
Integrin_alpha2 domain-containing protein.
   
 0.961
ITGA3
Integrin subunit alpha 3; Belongs to the integrin alpha chain family.
   
 0.961
CD36
CD36 molecule; Belongs to the CD36 family.
    
 0.958
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.941
SDC4
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
  0.904
THBS1
Thrombospondin 1.
   
  0.898
ITGA4
Integrin subunit alpha 4; Belongs to the integrin alpha chain family.
   
 0.896
ITGA9
Integrin subunit alpha 9.
   
 0.881
ITGA8
Integrin subunit alpha 8; Belongs to the integrin alpha chain family.
   
 0.867
ITGA11
Integrin subunit alpha 11; Belongs to the integrin alpha chain family.
   
 
 0.827
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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