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STRINGSTRING
LIN28A protein (Latimeria chalumnae) - STRING interaction network
"LIN28A" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIN28AUncharacterized protein; Lin-28 homolog A (C. elegans) (205 aa)    
Predicted Functional Partners:
SOX2
SRY-box 2; SRY (sex determining region Y)-box 2 (315 aa)
     
 
  0.904
MYC
MYC proto-oncogene, bHLH transcription factor; V-myc avian myelocytomatosis viral oncogene homolog (412 aa)
       
 
  0.865
KLF4
Kruppel-like factor 4 (gut) (429 aa)
       
 
  0.863
ZCCHC11
Zinc finger, CCHC domain containing 11 (1706 aa)
     
 
  0.837
ENSLACG00000012622
annotation not available (413 aa)
     
 
  0.832
ENSLACG00000012408
POU domain, class 5, transcription factor 3 (452 aa)
     
 
  0.799
ENSLACG00000005403
Kruppel-like factor 4b (428 aa)
     
 
  0.772
PIWIL2
Piwi-like RNA-mediated gene silencing 2; Belongs to the argonaute family (954 aa)
     
 
  0.759
MYCL
MYCL proto-oncogene, bHLH transcription factor; V-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog (353 aa)
     
   
  0.753
PIWIL1
Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family (877 aa)
     
 
  0.742
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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