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NFKB1 protein (Latimeria chalumnae) - STRING interaction network
"NFKB1" - Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFKB1Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 (969 aa)    
Predicted Functional Partners:
CHUK
Conserved helix-loop-helix ubiquitous kinase (700 aa)
     
  0.997
NFKBIA
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha (298 aa)
     
0.988
IL6
Interleukin 6 (interferon, beta 2) (149 aa)
     
  0.943
IKBKG
Inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma (435 aa)
     
  0.942
NFKBIB
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta (397 aa)
     
0.940
ENSLACG00000007235
Uncharacterized protein (230 aa)
     
  0.931
ENSLACG00000000241
Uncharacterized protein (143 aa)
     
  0.931
BCL3
B-cell CLL/lymphoma 3 (419 aa)
     
0.920
MAP3K8
Mitogen-activated protein kinase kinase kinase 8 (477 aa)
     
  0.918
REL
V-rel reticuloendotheliosis viral oncogene homolog (avian) (593 aa)
     
0.918
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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