STRINGSTRING
PHF16 protein (Latimeria chalumnae) - STRING interaction network
"PHF16" - PHD finger protein 16 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF16PHD finger protein 16 (823 aa)    
Predicted Functional Partners:
ASH1L
Ash1 (absent, small, or homeotic)-like (Drosophila) (925 aa)
     
  0.749
KAT7
K(lysine) acetyltransferase 7 (611 aa)
     
  0.663
KAT5
K(lysine) acetyltransferase 5 (513 aa)
     
  0.630
KAT6A
K(lysine) acetyltransferase 6A (1506 aa)
     
  0.630
KAT6B
K(lysine) acetyltransferase 6B (1798 aa)
     
  0.630
KAT8
K(lysine) acetyltransferase 8 (484 aa)
     
  0.630
ENSLACG00000001672
Uncharacterized protein (244 aa)
     
  0.630
MEAF6
MYST/Esa1-associated factor 6 (200 aa)
     
  0.571
ING4
Inhibitor of growth family, member 4 (167 aa)
     
  0.535
ING5
Inhibitor of growth family, member 5 (143 aa)
     
  0.535
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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