Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
LOC102363814PINc domain-containing protein. (198 aa)    
Predicted Functional Partners:
UTP11
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.980
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.973
UTP3
UTP3 small subunit processome component.
   
 0.973
UTP14A
Uncharacterized protein.
   
 0.963
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
   
 0.955
WDR46
WD repeat domain 46.
   
 0.954
UTP20
UTP20 small subunit processome component.
   
 0.950
RCL1
RNA terminal phosphate cyclase like 1.
   
 0.948
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
 0.945
RRP9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
 0.944
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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