STRINGSTRING
FCF1 protein (Latimeria chalumnae) - STRING interaction network
"FCF1" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FCF1Uncharacterized protein (198 aa)    
Predicted Functional Partners:
KRR1
KRR1, small subunit (SSU) processome component, homolog (yeast); Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (379 aa)
     
  0.911
UTP3
UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) (496 aa)
     
 
  0.865
BMS1
BMS1 homolog, ribosome assembly protein (yeast) (1255 aa)
     
 
  0.859
UTP11L
UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast); Involved in nucleolar processing of pre-18S ribosomal RNA (254 aa)
     
 
    0.852
MPHOSPH10
M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein); Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing (671 aa)
     
  0.842
DDX52
DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 (615 aa)
     
 
  0.840
PNO1
Partner of NOB1 homolog (S. cerevisiae) (250 aa)
     
  0.833
MAK16
MAK16 homolog (S. cerevisiae) (304 aa)
     
        0.808
EBNA1BP2
EBNA1 binding protein 2 (146 aa)
     
        0.807
UTP6
UTP6, small subunit (SSU) processome component, homolog (yeast) (597 aa)
     
 
  0.805
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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