Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF292Zinc finger protein 292. (2733 aa)    
Predicted Functional Partners:
H3AIP7_LATCH
Uncharacterized protein.
   
 0.755
ZNF644
Zinc finger protein 644.
  
 
 0.658
MED13L
Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
   
 
 0.655
FOXN3
Forkhead box N3.
    
 0.655
RALGAPB
Ral GTPase activating protein non-catalytic beta subunit.
      
 0.641
TAF4B
TATA-box binding protein associated factor 4b.
    
 
 0.615
TADA3
Transcriptional adaptor 3.
    
 
 0.614
TMTC3
Transmembrane O-mannosyltransferase targeting cadherins 3.
   
 0.611
SRSF12
Serine and arginine rich splicing factor 12.
    
 
 0.597
TCF20
Transcription factor 20.
  
 0.596
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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