Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MUC5ACUncharacterized protein. (2574 aa)    
Predicted Functional Partners:
F8
Coagulation factor VIII; Belongs to the multicopper oxidase family.
    
 0.851
ADAMTS13
ADAM metallopeptidase with thrombospondin type 1 motif 13.
    
 0.825
H2ZZQ4_LATCH
LRRCT domain-containing protein.
   
 0.792
GP1BB
Glycoprotein Ib platelet subunit beta.
    
 0.709
NUP214
Nup214_FG domain-containing protein.
    
 0.680
NUP98
Nucleoporin 98.
    
 0.655
NUP43
Nucleoporin 43.
    
 0.640
H3AM01_LATCH
Integrin beta; Belongs to the integrin beta chain family.
   
 0.631
F5
Coagulation factor V; Belongs to the multicopper oxidase family.
    
 0.628
NUP88
Nucleoporin 88.
    
 0.621
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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