Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TMEM135Transmembrane protein 135. (464 aa)    
Predicted Functional Partners:
TIMM17A
Translocase of inner mitochondrial membrane 17A.
      
 0.695
PXMP4
Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.641
TMEM115
Transmembrane protein 115.
      
 0.641
CCDC170
Coiled-coil domain containing 170.
      
 0.610
H3AN88_LATCH
Uncharacterized protein.
      
 0.609
UBL7
Ubiquitin like 7.
      
 0.603
MPV17L2
MPV17 mitochondrial inner membrane protein like 2; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.597
GPATCH1
G-patch domain containing 1.
      
 0.591
TMUB1
Transmembrane and ubiquitin like domain containing 1.
      
 0.591
NDUFAF6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
      
 0.590
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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