STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM135Transmembrane protein 135. (464 aa)    
Predicted Functional Partners:
PXMP4
Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.685
TIMM17A
Translocase of inner mitochondrial membrane 17A.
      
 0.568
MPV17L2
MPV17 mitochondrial inner membrane protein like 2; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.546
CCDC170
Coiled-coil domain containing 170.
      
 0.469
SMPD1
Sphingomyelin phosphodiesterase 1.
      
 0.461
TIMM17B
Translocase of inner mitochondrial membrane 17B.
      
 0.430
ACAT2
Acetyl-CoA acetyltransferase 2; Belongs to the thiolase-like superfamily. Thiolase family.
   
  
 0.429
ACAD9
Acyl-CoA dehydrogenase family member 9.
      
 0.420
ACADVL
Acyl-CoA dehydrogenase very long chain.
      
 0.420
GPATCH1
G-patch domain containing 1.
      
 0.408
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.