STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM18Transmembrane protein 18. (80 aa)    
Predicted Functional Partners:
FTO
FTO alpha-ketoglutarate dependent dioxygenase.
      
 0.557
MC4R
Melanocortin 4 receptor.
      
 0.531
CHRNA5
Cholinergic receptor nicotinic alpha 5 subunit.
      
 0.503
CHRNA3
Cholinergic receptor nicotinic beta 4 subunit.
      
 0.503
GET4
Guided entry of tail-anchored proteins factor 4.
      
 0.436
RPL27A
Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
      
 0.420
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.