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STRINGSTRING
TMEM18 protein (Latimeria chalumnae) - STRING interaction network
"TMEM18" - Transmembrane protein 18 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM18Transmembrane protein 18 (80 aa)    
Predicted Functional Partners:
FTO
FTO, alpha-ketoglutarate dependent dioxygenase; Fat mass and obesity associated (423 aa)
           
  0.796
KCTD15
Potassium channel tetramerization domain containing 15 (265 aa)
     
   
  0.783
RPL6
Ribosomal protein L6 (263 aa)
           
  0.782
NEGR1
Uncharacterized protein; Neuronal growth regulator 1 (213 aa)
           
  0.778
MRPL33
Mitochondrial ribosomal protein L33 (65 aa)
           
  0.774
ZNF385B
Zinc finger protein 385B (393 aa)
           
  0.774
ZFP64
ZFP64 zinc finger protein (590 aa)
           
  0.773
CCDC171
Coiled-coil domain containing 171 (1275 aa)
           
  0.773
SLC26A3
Chloride anion exchanger; Chloride/bicarbonate exchanger (669 aa)
           
  0.760
SH3YL1
SH3 and SYLF domain containing 1 (341 aa)
           
  0.760
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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