Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPL37Ribosomal protein L37; Binds to the 23S rRNA. (96 aa)    
Predicted Functional Partners:
RPS27A
Ribosomal protein S27a.
   
 0.998
RPS15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.998
RPL11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 0.998
RPL21
Ribosomal protein L21.
   
 0.998
RPL12
Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
   
 0.998
RPL15
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.997
RPS20
Ribosomal_S10 domain-containing protein.
   
 
 0.997
RPL24
Ribosomal protein L24.
   
 0.997
RPL9
Ribosomal protein L9.
   
 0.997
RPL39
Ribosomal protein L39.
   
 0.997
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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