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CASQ1 protein (Latimeria chalumnae) - STRING interaction network
"CASQ1" - Calsequestrin 1 (fast-twitch, skeletal muscle) in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASQ1Calsequestrin 1 (fast-twitch, skeletal muscle); Calsequestrin is a high-capacity, moderate affinity, calcium-binding protein and thus acts as an internal calcium store in muscle (466 aa)    
Predicted Functional Partners:
RYR1
Ryanodine receptor 1 (skeletal) (5024 aa)
     
   
  0.515
RYR3
Ryanodine receptor 3 (3558 aa)
     
   
  0.494
ATP2A3
ATPase, Ca++ transporting, ubiquitous; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium (992 aa)
     
   
  0.492
QDPR
Quinoid dihydropteridine reductase (241 aa)
           
  0.421
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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