STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHRNA5Cholinergic receptor nicotinic alpha 5 subunit. (459 aa)    
Predicted Functional Partners:
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
  
0.786
CHRNA2
Cholinergic receptor nicotinic alpha 2 subunit.
  
0.723
CHRNA4
Cholinergic receptor nicotinic alpha 4 subunit.
  
0.711
CHRNB1
Cholinergic receptor nicotinic beta 1 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.687
CHRNA3
Cholinergic receptor nicotinic beta 4 subunit.
  
0.681
CHRNG
Cholinergic receptor nicotinic gamma subunit.
  
0.656
CHRNE
Cholinergic receptor nicotinic epsilon subunit.
  
0.654
CHRNB2
Cholinergic receptor nicotinic beta 2 subunit.
  
0.651
H2ZUZ3_LATCH
Uncharacterized protein.
  
0.641
CHRNA7
Cholinergic receptor, nicotinic, alpha 7 (neuronal).
  
0.641
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.