STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD81Tetraspanin. (184 aa)    
Predicted Functional Partners:
LOC102358653
Tetraspanin.
    
 
0.892
PTGFRN
Prostaglandin F2 receptor inhibitor.
    
 
 0.866
TSG101
Tumor susceptibility 101.
      
 0.787
CD63
Tetraspanin.
    
 
0.775
CLDN1
Claudin 1.
      
 0.763
LAMP1
Lysosomal associated membrane protein 1.
   
 
 0.710
LOC102346674
Uncharacterized protein.
    
 0.680
H2ZX70_LATCH
Uncharacterized protein.
    
  0.674
H3A3U7_LATCH
Uncharacterized protein.
    
  0.674
IGSF8
Immunoglobulin superfamily member 8.
    
 
 0.640
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.