STRINGSTRING
GARS protein (Latimeria chalumnae) - STRING interaction network
"GARS" - glycyl-tRNA synthetase in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GARSglycyl-tRNA synthetase (520 aa)    
Predicted Functional Partners:
EPRS
glutamyl-prolyl-tRNA synthetase (1965 aa)
   
 
  0.990
IARS
isoleucyl-tRNA synthetase (1266 aa)
   
 
  0.952
MARS
methionyl-tRNA synthetase (905 aa)
     
 
  0.876
YARS
tyrosyl-tRNA synthetase (528 aa)
   
   
  0.869
POLG
Polymerase (DNA directed), gamma (1194 aa)
     
 
  0.867
AARS
alanyl-tRNA synthetase (968 aa)
   
 
  0.865
QARS
glutaminyl-tRNA synthetase (769 aa)
   
 
  0.857
TARSL2
threonyl-tRNA synthetase-like 2 (784 aa)
     
 
  0.851
TARS
threonyl-tRNA synthetase (722 aa)
     
 
  0.851
NARS
asparaginyl-tRNA synthetase (564 aa)
   
 
  0.817
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
Server load: low (11%) [HD]