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STRINGSTRING
NEK4 protein (Latimeria chalumnae) - STRING interaction network
"NEK4" - NIMA-related kinase 4 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEK4NIMA-related kinase 4 (854 aa)    
Predicted Functional Partners:
SDCCAG8
Serologically defined colon cancer antigen 8 (726 aa)
     
   
  0.810
SPATA7
Uncharacterized protein; Spermatogenesis associated 7 (398 aa)
     
 
  0.792
NPHP4
Nephronophthisis 4 (1207 aa)
     
 
  0.783
TK2
Thymidine kinase 2, mitochondrial (233 aa)
     
   
  0.675
SEPT10
Uncharacterized protein; Septin 10; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. Septin GTPase family (373 aa)
           
  0.646
LRRCC1
Leucine rich repeat and coiled-coil centrosomal protein 1 (1024 aa)
           
  0.599
WBSCR16
Uncharacterized protein; Williams-Beuren syndrome chromosome region 16 homolog (human) (230 aa)
       
 
  0.586
DDX6
DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family (485 aa)
     
   
  0.556
PEAK1
Pseudopodium-enriched atypical kinase 1 (1773 aa)
           
  0.556
RPGRIP1
Retinitis pigmentosa GTPase regulator interacting protein 1 (1244 aa)
       
 
  0.512
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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