STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEK4NIMA related kinase 4. (854 aa)    
Predicted Functional Partners:
RPGRIP1L
RPGRIP1 like.
   
 
 0.601
H3A652_LATCH
Uncharacterized protein.
      
 0.597
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.
      
 0.535
GLT8D1
Glycosyltransferase 8 domain containing 1.
 
 
  
 0.485
CNOT8
CCR4-NOT transcription complex subunit 8.
      
 0.473
NEK7
NIMA related kinase 7; Belongs to the protein kinase superfamily.
    
0.473
NEK6
NIMA related kinase 6; Belongs to the protein kinase superfamily.
    
0.473
SPATA7
Spermatogenesis associated 7.
    
 
 0.462
TTC21B
Tetratricopeptide repeat domain 21B.
    
 
 0.456
ALG8
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
      
 0.424
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.